ps_id |
PROSITE pattern ID such as "ZINC_FINGER_C2H2_1" |
ps_ac |
PROSITE access number such as "PS00028" |
pat_len |
Number of positions in the pattern description |
exp_y |
Expected number of occurance in yeast genome |
obs_y |
Number of times the patterns is observed in yeast intergenic region |
z_score_y |
Z-score for yeast |
pvalue_y |
P-value for yeast |
rank_y |
To what degree certain pseudomotifs are overrepresented in yeast genome |
class_y |
including "over-represented", "under-represented" or "non-significant", classification of the pattern according to its z_score and pvalue in yeast. |
obs_w |
Number of times the patterns is observed in worm intergenic region |
exp_w |
Expected number of occurance in worm genome |
z_score_w |
Z-score for worm |
pvalue_w |
P-value for worm |
rank_w |
To what degree certain pseudomotifs are overrepresented in worm genome |
class_w |
including "over-represented", "under-represented" or "non-significant", classification of the pattern according to its z_score and p
value in worm. |
obs_f |
Number of times the patterns is observed in fly intergenic region |
exp_f |
Expected number of occurance in fly genome |
z_score_f |
Z-score for fly |
pvalue_f |
P-value for fly |
rank_f |
To what degree certain pseudomotifs are overrepresented in fly genome |
class_f |
including "over-represented", "under-represented" or "non-significant", classification of the pattern according to its z_score and p
value in fly. |
obs_h |
Number of times the patterns is observed in intergenic region of human chromosome 21 & 22 |
exp_h |
Expected number of occurance in human chromosome 21 & 22 |
z_score_h |
Z-score for human chromosome 21 & 22 |
pvalue_h |
P-value for human chromosome 21 & 22 |
rank_h |
To what degree certain pseudomotifs are overrepresented in human chromosome 21 & 22 |
class_h |
including "over-represented", "under-represented" or "non-significant", classification of the pattern according to its z_score and p
value in human chromosome 21 & 22. |