#chr band match_start match_stop strand swp_id rp_gene_name gene_id query_start query_stop query_len frac inserts dels shifts stops aa_ident disable polya exons exon_bound exon_len intron_bound intron_len class mRNA_len mRNA_gc CDS_len CDS_gc pgene_cds_gc isochore_gc isochore_class dna_ident divergence chr1 p32.3 54759294 54760177 - RSP4_HUMAN RPSA chr1_RSP4_HUMAN.68 1 294 295 1 3 1 1 7 0.74 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.46 0.39 L2 0.85 0.17 chr1 p32.1 67962769 67963363 - RSP4_HUMAN RPSA chr1_RSP4_HUMAN.89 1 205 295 0.69 1 7 1 0 0.71 D 3 1 . . . . FRAG 1039 0.25 888 0.53 0.5 0.38 L2 0.816 chr1 p31.3 69508655 69509249 + RSP4_HUMAN RPSA chr1_RSP4_HUMAN.91 1 205 295 0.69 1 7 1 0 0.71 D 3 1 . . . . FRAG 1039 0.25 888 0.53 0.5 0.43 H1 0.813 chr1 p21.3 108615770 108616651 - RSP4_HUMAN RPSA chr1_RSP4_HUMAN.125 1 295 295 1 0 1 0 0 0.97 0 1 1 . . . . PSSD1 1039 0.25 888 0.53 0.52 0.36 L1 0.98 0.01 chr1 q21.3 156334652 156335536 + RSP4_HUMAN RPSA chr1_RSP4_HUMAN.154 1 295 295 1 0 0 0 1 0.95 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.52 0.48 H2 0.97 0.03 chr1 q22 162460392 162461276 - RSP4_HUMAN RPSA chr1_RSP4_HUMAN.161 1 295 295 1 2 0 2 1 0.95 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.51 0.44 H1 0.96 0.04 chr1 q24.2 182902560 182903379 + RSP4_HUMAN RPSA chr1_RSP4_HUMAN.194 14 294 295 0.95 3 8 3 3 0.82 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.5 0.37 L2 0.88 0.11 chr1 q43 245962093 245962974 + RSP4_HUMAN RPSA chr1_RSP4_HUMAN.253 1 295 295 1 2 1 2 2 0.89 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.52 0.4 L2 0.92 0.08 chr10 p14 15942710 15943594 - RSP4_HUMAN RPSA chr10_RSP4_HUMAN.10 1 295 295 1 2 0 2 5 0.85 D 1 1 . . . . PSSD1 1039 0.25 888 0.53 0.5 0.43 H1 0.9 0.1 chr10 p12.31 28251696 28252573 + RSP4_HUMAN RPSA chr10_RSP4_HUMAN.15 1 295 295 1 3 2 3 0 0.85 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.53 0.43 H1 0.91 0.09 chr10 q22.2 77455395 77456267 + RSP4_HUMAN RPSA chr10_RSP4_HUMAN.59 1 293 295 0.99 0 2 0 0 0.87 0 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.51 0.36 L1 0.92 0.08 chr11 q23.2 114350566 114351417 + RSP4_HUMAN RPSA chr11_RSP4_HUMAN.80 1 292 295 0.99 3 7 3 0 0.76 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.5 0.39 L2 0.85 0.17 chr12 p13.31 9048506 9049123 - RSP4_HUMAN RPSA chr12_RSP4_HUMAN.17 9 216 295 0.71 4 2 4 2 0.73 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.49 0.41 H1 0.84 0.18 chr12 q14.1 66730093 66730970 + RSP4_HUMAN RPSA chr12_RSP4_HUMAN.77 1 295 295 1 7 0 7 1 0.86 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.5 0.32 L1 0.91 0.08 chr12 q14.3 72414681 72415565 - RSP4_HUMAN RPSA chr12_RSP4_HUMAN.81 1 295 295 1 0 0 0 0 0.96 0 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.52 0.41 H1 0.98 0.02 chr13 q12.11 18750299 18751182 + RSP4_HUMAN RPSA chr13_RSP4_HUMAN.0 1 295 295 1 2 1 2 0 0.98 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.53 0.46 H2 0.98 0.15 chr13 q21.31 67584992 67585861 - RSP4_HUMAN RPSA chr13_RSP4_HUMAN.31 1 295 295 1 2 5 2 1 0.89 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.51 0.35 L1 0.94 0.06 chr14 q22.2 53298820 53299671 - RSP4_HUMAN RPSA chr14_RSP4_HUMAN.41 5 292 295 0.98 2 4 2 2 0.81 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.5 0.4 L2 0.88 0.11 chr14 q24.2 70743946 70744829 - RSP4_HUMAN RPSA chr14_RSP4_HUMAN.67 1 295 295 1 1 0 1 2 0.94 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.52 0.44 H1 0.97 0.04 chr14 q32.31 97380086 97380970 + RSP4_HUMAN RPSA chr14_RSP4_HUMAN.93 1 295 295 1 0 0 0 1 0.95 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.51 0.47 H2 0.97 0.04 chr14 q32.33 102758350 102759227 - RSP4_HUMAN RPSA chr14_RSP4_HUMAN.102 2 295 295 1 1 1 1 3 0.89 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.53 0.46 H2 0.94 0.06 chr15 q15.3 48582304 48583179 + RSP4_HUMAN RPSA chr15_RSP4_HUMAN.23 1 295 295 1 0 3 0 0 0.89 0 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.51 0.42 H1 0.94 0.07 chr16 q22.3 75683574 75684458 + RSP4_HUMAN RPSA chr16_RSP4_HUMAN.62 1 295 295 1 0 0 0 2 0.92 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.52 0.41 H1 0.95 0.05 chr17 q24.1 60927906 60928837 - RSP4_HUMAN RPSA chr17_RSP4_HUMAN.87 97 295 295 0.67 10 0 6 1 0.77 D 0 2 com(60927906..60928168 60928473..60928837) com(263 365) com(60928169..60928472) com(304) PSSD4 1039 0.25 888 0.53 0.49 0.43 H1 0.82 0.16 chr17 q24.3 65082361 65085022 + RSP4_HUMAN RPSA chr17_RSP4_HUMAN.98 1 277 295 0.94 5 0 4 4 0.69 D 0 4 (65082361..65082524 65082874..65083053 65083352..65083618 65084915..65085022) (164 180 267 108) (65082525..65082873 65083054..65083351 65083619..65084914) (349 298 1296) PSSD4 1039 0.25 888 0.53 0.51 0.45 H1 0.84 0.26 chr18 q21.2 53372926 53373752 - RSP4_HUMAN RPSA chr18_RSP4_HUMAN.34 4 295 295 0.99 4 15 4 3 0.72 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.52 0.38 L2 0.83 0.19 chr19 q12 40116436 40117320 + RSP4_HUMAN RPSA chr19_RSP4_HUMAN.48 1 295 295 1 0 0 0 0 0.99 0 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.53 0.42 H1 0.99 0.01 chr2 p14 61474945 61475821 + RSP4_HUMAN RPSA chr2_RSP4_HUMAN.42 1 295 295 1 1 3 1 0 0.97 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.52 0.42 H1 0.98 0.02 chr2 p12 72062568 72063435 + RSP4_HUMAN RPSA chr2_RSP4_HUMAN.59 1 294 295 1 5 5 4 2 0.82 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.5 0.41 H1 0.88 0.13 chr2 p11.2 84616521 84617373 + RSP4_HUMAN RPSA chr2_RSP4_HUMAN.67 6 295 295 0.98 3 8 1 6 0.75 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.49 0.47 H2 0.84 0.18 chr2 q13 106105095 106105974 + RSP4_HUMAN RPSA chr2_RSP4_HUMAN.85 1 295 295 1 4 3 3 1 0.78 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.49 0.35 L1 0.86 0.15 chr2 q31.2 173475927 173476796 + RSP4_HUMAN RPSA chr2_RSP4_HUMAN.130 1 295 295 1 5 4 5 2 0.8 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.51 0.44 H1 0.88 0.13 chr2 q31.3 175827985 175828864 + RSP4_HUMAN RPSA chr2_RSP4_HUMAN.135 1 295 295 1 3 2 2 1 0.77 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.52 0.38 L2 0.87 0.13 chr2 q35 209738532 209739378 + RSP4_HUMAN RPSA chr2_RSP4_HUMAN.164 1 295 295 1 5 11 5 3 0.72 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.52 0.43 H1 0.85 0.15 chr20 q11.22 32758276 32758397 - RSP4_HUMAN RPSA chr20_RSP4_HUMAN.29 1 38 295 0.13 4 0 1 0 0.73 D 0 1 . . . . FRAG 1039 0.25 888 0.53 0.48 0.47 H2 0.826 chr20 q13.13 49549874 49550753 - RSP4_HUMAN RPSA chr20_RSP4_HUMAN.50 1 294 295 1 6 2 4 0 0.84 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.53 0.45 H1 0.9 0.1 chr21 q22.2 36843434 36843772 + RSP4_HUMAN RPSA chr21_RSP4_HUMAN.21 168 283 295 0.39 3 2 3 4 0.66 D 1 1 . . . . FRAG 1039 0.25 888 0.53 0.57 0.44 H1 0.805 chr3 p26.3 2907062 2907587 - RSP4_HUMAN RPSA chr3_RSP4_HUMAN.1 1 178 295 0.6 2 2 2 3 0.78 D 0 1 . . . . FRAG 1039 0.25 888 0.53 0.48 0.36 L1 0.861 chr3 p21.33 40708389 40742994 + RSP4_HUMAN RPSA chr3_RSP4_HUMAN.28 1 295 295 1 2 0 1 1 0.97 D 0 6 (40708389..40708529 40709340..40709459 40741378..40741628 40742272..40742409 40742522..40742689 40742899..40742994) (141 120 251 138 168 96) (40708530..40709339 40709460..40741377 40741629..40742271 40742410..40742521 40742690..40742898) (810 31918 643 112 209) FUNC 1039 0.25 888 0.53 0.53 0.44 H1 0.977 chr3 q26.31 174133359 174134200 + RSP4_HUMAN RPSA chr3_RSP4_HUMAN.111 5 292 295 0.98 5 7 5 4 0.75 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.48 0.36 L1 0.85 0.18 chr3 q27.3 189362087 189362978 + RSP4_HUMAN RPSA chr3_RSP4_HUMAN.122 1 295 295 1 3 0 1 1 0.85 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.52 0.46 H2 0.91 0.09 chr3 q29 201594604 201595483 - RSP4_HUMAN RPSA chr3_RSP4_HUMAN.136 1 295 295 1 2 3 1 0 0.89 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.54 0.51 H2 0.94 0.06 chr4 q21.23 80307550 80308429 - RSP4_HUMAN RPSA chr4_RSP4_HUMAN.49 1 295 295 1 1 2 1 3 0.88 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.5 0.4 L2 0.93 0.07 chr4 q24 106913364 106914065 - RSP4_HUMAN RPSA chr4_RSP4_HUMAN.64 8 250 295 0.82 9 12 6 6 0.51 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.41 0.41 H1 0.7 0.42 chr4 q31.1 144216555 144217430 + RSP4_HUMAN RPSA chr4_RSP4_HUMAN.91 1 295 295 1 3 4 2 3 0.87 D 1 1 . . . . PSSD1 1039 0.25 888 0.53 0.51 0.37 L2 0.92 0.07 chr4 q35.1 186093742 186094681 + RSP4_HUMAN RPSA chr4_RSP4_HUMAN.114 1 292 295 0.99 8 6 7 2 0.7 D 3 2 (186093742..186094411 186094505..186094681) (670 177) (186094412..186094504) 93 PSSD4 1039 0.25 888 0.53 0.61 0.42 H1 0.73 0.19 chr5 p13.3 40683751 40684625 - RSP4_HUMAN RPSA chr5_RSP4_HUMAN.16 1 292 295 0.99 10 3 7 3 0.72 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.48 0.38 L2 0.83 0.18 chr5 p13.3 40688269 40689143 - RSP4_HUMAN RPSA chr5_RSP4_HUMAN.17 1 292 295 0.99 10 3 7 3 0.72 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.48 0.38 L2 0.83 0.18 chr5 q15 100079589 100079675 + RSP4_HUMAN RPSA chr5_RSP4_HUMAN.75 1 29 295 0.1 0 0 0 0 0.83 0 3 1 . . . . FRAG 1039 0.25 888 0.53 0.45 0.33 L1 0.912 chr5 q23.2 125986290 125987042 - RSP4_HUMAN RPSA chr5_RSP4_HUMAN.86 32 288 295 0.87 9 3 9 4 0.7 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.49 0.36 L1 0.81 0.24 chr5 q35.1 174031643 174032156 + RSP4_HUMAN RPSA chr5_RSP4_HUMAN.128 4 73 295 0.24 2 3 2 1 0.75 D 0 2 (174031643..174031760 174032064..174032156) (118 93) (174031761..174032063) 303 PSSD4 1039 0.25 888 0.53 0.43 0.47 H2 0.78 0.18 chr5 q35.1 174032732 174033726 + RSP4_HUMAN RPSA chr5_RSP4_HUMAN.130 70 292 295 0.76 9 2 4 2 0.71 D 3 2 (174032732..174033155 174033469..174033726) (424 258) (174033156..174033468) 313 PSSD4 1039 0.25 888 0.53 0.52 0.47 H2 0.83 0.18 chr6 p21.31 34153889 34154773 + RSP4_HUMAN RPSA chr6_RSP4_HUMAN.38 1 295 295 1 0 0 0 2 0.88 D 2 1 . . . . PSSD2 1039 0.25 888 0.53 0.5 0.42 H1 0.92 0.09 chr6 p12.1 58333137 58334008 + RSP4_HUMAN RPSA chr6_RSP4_HUMAN.78 4 295 295 0.99 1 1 1 2 0.84 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.5 0.36 L1 0.9 0.11 chr6 q14.1 76760618 76761477 - RSP4_HUMAN RPSA chr6_RSP4_HUMAN.87 14 294 295 0.95 25 10 9 5 0.68 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.44 0.45 H1 0.83 0.21 chr6 q14.3 86135733 86136090 - RSP4_HUMAN RPSA chr6_RSP4_HUMAN.97 1 123 295 0.42 2 3 2 2 0.76 D 3 1 . . . . FRAG 1039 0.25 888 0.53 0.47 0.37 L2 0.806 chr6 q21 107461789 107462556 + RSP4_HUMAN RPSA chr6_RSP4_HUMAN.111 1 288 295 0.98 16 38 8 10 0.44 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.39 0.35 L1 0.7 0.4 chr6 q22.1 117950082 117950947 - RSP4_HUMAN RPSA chr6_RSP4_HUMAN.126 2 294 295 0.99 3 4 3 1 0.9 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.52 0.39 L2 0.94 0.06 chr6 q22.2 119925785 119926406 - RSP4_HUMAN RPSA chr6_RSP4_HUMAN.129 87 295 295 0.71 1 2 1 2 0.86 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.53 0.39 L2 0.92 0.08 chr6 q23.1 138541182 138541283 - RSP4_HUMAN RPSA chr6_RSP4_HUMAN.148 1 34 295 0.12 0 0 0 1 0.82 d 0 1 . . . . FRAG 1039 0.25 888 0.53 0.47 0.38 L2 0.898 chr6 q23.3 144625464 144626332 + RSP4_HUMAN RPSA chr6_RSP4_HUMAN.156 2 293 295 0.99 9 4 7 4 0.76 D 2 1 . . . . PSSD2 1039 0.25 888 0.53 0.5 0.41 H1 0.84 0.17 chr7 p22.2 5972571 5972807 + RSP4_HUMAN RPSA chr7_RSP4_HUMAN.4 216 294 295 0.27 0 0 0 0 0.87 0 3 1 . . . . FRAG 1039 0.25 888 0.53 0.54 0.47 H2 0.89 chr7 q22.1 101998287 101999165 - RSP4_HUMAN RPSA chr7_RSP4_HUMAN.72 2 295 295 1 3 0 3 1 0.93 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.53 0.53 H3 0.94 0.06 chr8 p21.3 20680060 20680937 + RSP4_HUMAN RPSA chr8_RSP4_HUMAN.33 1 295 295 1 7 0 7 1 0.86 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.5 0.41 H1 0.91 0.08 chr8 q21.12 80241154 80242038 + RSP4_HUMAN RPSA chr8_RSP4_HUMAN.78 1 295 295 1 0 0 0 0 0.96 0 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.52 0.41 H1 0.97 0.16 chr8 q21.3 87961238 87961634 - RSP4_HUMAN RPSA chr8_RSP4_HUMAN.84 164 295 295 0.45 1 0 1 3 0.85 D 1 1 . . . . FRAG 1039 0.25 888 0.53 0.52 0.36 L1 0.917 chr8 q23.3 109230121 109231006 - RSP4_HUMAN RPSA chr8_RSP4_HUMAN.114 1 295 295 1 18 11 7 7 0.65 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.46 0.35 L1 0.66 0.2 chr9 q21.13 65563902 65564195 + RSP4_HUMAN RPSA chr9_RSP4_HUMAN.42 198 295 295 0.33 0 0 0 0 0.85 0 0 1 . . . . FRAG 1039 0.25 888 0.53 0.51 0.4 L2 0.925 chr9 q21.13 67461367 67462251 + RSP4_HUMAN RPSA chr9_RSP4_HUMAN.43 1 295 295 1 0 0 0 1 0.96 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.52 0.42 H1 0.98 0.03 chr9 q21.33 79460651 79461534 + RSP4_HUMAN RPSA chr9_RSP4_HUMAN.53 1 295 295 1 1 0 1 1 0.91 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.52 0.46 H2 0.94 0.06 chr9 q34.11 117753518 117754691 - RSP4_HUMAN RPSA chr9_RSP4_HUMAN.79 1 287 295 0.97 3 0 3 1 0.9 D 0 2 com(117753518..117753786 117754082..117754691) com(269 610) com(117753787..117754081) com(295) PSSD4 1039 0.25 888 0.53 0.5 0.45 H1 0.94 0.06 chrX p11.4 39355882 39356756 + RSP4_HUMAN RPSA chrX_RSP4_HUMAN.22 1 295 295 1 1 3 1 0 0.95 D 1 1 . . . . PSSD1 1039 0.25 888 0.53 0.52 0.43 H1 0.98 0.02 chrX p11.23 46878211 46879078 + RSP4_HUMAN RPSA chrX_RSP4_HUMAN.25 1 295 295 1 5 4 5 3 0.77 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.49 0.49 H2 0.84 0.21 chrX p11.23 47327916 47328783 + RSP4_HUMAN RPSA chrX_RSP4_HUMAN.27 1 295 295 1 5 4 5 3 0.77 D 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.49 0.46 H2 0.84 0.21 chrX q13.1 65873258 65873620 + RSP4_HUMAN RPSA chrX_RSP4_HUMAN.36 99 220 295 0.41 0 1 0 1 0.93 D 3 1 . . . . FRAG 1039 0.25 888 0.53 0.53 0.38 L2 0.956 chrX q21.31 80328743 80329627 - RSP4_HUMAN RPSA chrX_RSP4_HUMAN.44 1 295 295 1 0 0 0 0 0.97 0 0 1 . . . . PSSD0 1039 0.25 888 0.53 0.52 0.37 L2 0.98 0.02 chrX q22.1 92898082 92898970 - RSP4_HUMAN RPSA chrX_RSP4_HUMAN.52 1 295 295 1 2 0 1 0 0.94 D 1 1 . . . . PSSD1 1039 0.25 888 0.53 0.52 0.38 L2 0.96 0.04 chrX q22.2 96809523 96810410 - RSP4_HUMAN RPSA chrX_RSP4_HUMAN.55 2 295 295 1 16 6 7 1 0.71 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.48 0.4 L2 0.85 0.18 chrX q26.2 127999604 128000485 + RSP4_HUMAN RPSA chrX_RSP4_HUMAN.71 2 295 295 1 0 0 0 3 0.89 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.51 0.4 L2 0.93 0.08 chrX q28 147334111 147334978 - RSP4_HUMAN RPSA chrX_RSP4_HUMAN.85 1 292 295 0.99 5 3 4 4 0.7 D 3 1 . . . . PSSD3 1039 0.25 888 0.53 0.49 0.37 L2 0.78 0.19