Go directly to Alignment
Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 1529 Check: 0 ..
Name: MRPL15_CDS Len: 1529 Check: 1842 Weight: 1.24
Name: MRPL15_mRNA Len: 1529 Check: 1429 Weight: 1.24
Name: MRPL15P1 Len: 1529 Check: 9921 Weight: 0.76
Name: MRPL15P2 Len: 1529 Check: 9921 Weight: 0.76
Name: Consensus Len: 1529 Check: 2510 Weight: 0.00
//
1 130
MRPL15_CDS ATGGCCGGTC -CCTTGCAGG GCGGTGGGGC ---------- --CCGGGCCC
MRPL15_mRN CCCG AGACCACGTG GCCTC-CGAG CAGCTC---- -----AGGGC GCCC-TTGAA AGTTCTTGGA TCTGCGGGTT ATGGCCGGTC -CCTTGCAGG GCGGTGGGGC ---------- --CCGGGCCC
MRPL15P1 TGCAGGAACA AAGCGAGGGT GTCTCTCTTA CCACTCCTAT TCAACATTGT ACCAGATGGA GGATCTAGGC TATGCAATTA GGAAACAAAA GACATACAGG TCAGAAAGGA AGAAATAAAA CTCTTTTCGC
MRPL15P2 TGCAGGAACA AAGCGAGGGT GTCTCTCTTA CCACTCCTAT TCAACATTGT ACCAGATGGA GGATCTAGGC TATGCAATTA GGAAACAAAA GACATACAGG TCAGAAAGGA AGAAATAAAA CTCTTTTCGC
Consensus ........c. a..c.a.g.. g.ctc.c... c..ctc.... .....a..g. .cc...tg.a .g.tct.gg. t.tgc...t. atggcCggtc .cCtTgCAGG gCgGtggGGc .......... ..CcgggCcC
131 260
MRPL15_CDS TGGAC----C TACTCCGGGG CCTGCCGCGT GTGAGCCTGG CCAACTTAAA GCCGAATCCC GGCTCCAAGA AACCGGAGAG AAGACCAAGA GGTCGGAGAA GAGGTAGAAA ATGTGGCAGA GGCCATAAAG
MRPL15_mRN TGGAC----C TACTCCGGGG CCTGCCGCGT GTGAGCCTGG CCAACTTAAA GCCGAATCCC GGCTCCAAGA AACCGGAGAG AAGACCAAGA GGTCGGAGAA GAGGTAGAAA ATGTGGCAGA GGCCATAAAG
MRPL15P1 AGGTTATGGC AGCTCTGGGC CCTGCTGCGC ATGAGCCTGA CCAATTTAAA GCGGAATCCT GGCTCCAGGA AACCCATGAG ACGACCAAAA GGTCGGAGAA GAGGTAGAAA ATGCGGCAGA GGCCATAAAA
MRPL15P2 AGGTTATGGC AGCTCTGGGC CCTGCTGCGC ATGAGCCTGA CCAATTTAAA GCGGAATCCT GGCTCCAGGA AACCCATGAG ACGACCAAAA GGTCGGAGAA GAGGTAGAAA ATGCGGCAGA GGCCATAAAA
Consensus tGGac....C taCTCcGGGg CCTGCcGCGt gTGAGCCTGg CCAAcTTAAA GCcGAATCCc GGCTCCAaGA AACCggaGAG AaGACCAAgA GGTCGGAGAA GAGGTAGAAA ATGtGGCAGA GGCCATAAAg
261 390
MRPL15_CDS GAGAAAGGCA AAGAGGAACC CGGCCCCGCT TGGGCTTTGA GGGAGGCCAG ACTCCATTTT ACATCCGAAT CCCAAAATAC GGGTTTAACG AAGGACATAG TTTCAGACGC CAGTATAAGC CTTTGAGTCT
MRPL15_mRN GAGAAAGGCA AAGAGGAACC CGGCCCCGCT TGGGCTTTGA GGGAGGCCAG ACTCCATTTT ACATCCGAAT CCCAAAATAC GGGTTTAACG AAGGACATAG TTTCAGACGC CAGTATAAGC CTTTGAGTCT
MRPL15P1 GAGAAAGGCA GAGAGGAAAC TGGCTCTGCT -GGGCTTTGG GGATGGCCAG ACTCTATTTT ACATCGGAAT CCCAAAATAC AGATTTAATG AAGGACTTAG CTTCAGACAC CAGTATCAAC CTTTAAGTAT
MRPL15P2 GAGAAAGGCA GAGAGGAAAC TGGCTCTGCT -GGGCTTTGG GGATGGCCAG ACTCTATTTT ACATCGGAAT CCCAAAATAC AGATTTAATG AAGGACTTAG CTTCAGACAC CAGTATCAAC CTTTAAGTAT
Consensus GAGAAAGGCA aAGAGGAAcC cGGCcCcGCT tGGGCTTTGa GGgaGGCCAG ACTCcATTTT ACATCcGAAT CCCAAAATAC gGgTTTAAcG AAGGACaTAG tTTCAGACgC CAGTATaAgC CTTTgAGTcT
391 520
MRPL15_CDS CAATAGACTG CAGTATCTTA TTGATTTGGG TCGTGTTGAT CCTAGTCAAC CTATTGACTT AACCCAGCTT GTCAATGGGA GAGGTGTGAC CATCCAGCCA CTTAAAAGGG ATTATGGTGT CCAGCTGGTT
MRPL15_mRN CAATAGACTG CAGTATCTTA TTGATTTGGG TCGTGTTGAT CCTAGTCAAC CTATTGACTT AACCCAGCTT GTCAATGGGA GAGGTGTGAC CATCCAGCCA CTTAAAAGGG ATTATGGTGT CCAGCTGGTT
MRPL15P1 CAATAGACTG TAATATGTTA CTGATTTGGG TCGTGTTGAT CCTACTCAAC CTATTGACTT AACCCAGCTT GTCAATGGAA GAGGTGTGAC CATTCAGCCA CTTAAAGAGG ATTATGGTGT TCAGCTGGTC
MRPL15P2 CAATAGACTG TAATATGTTA CTGATTTGGG TCGTGTTGAT CCTACTCAAC CTATTGACTT AACCCAGCTT GTCAATGGAA GAGGTGTGAC CATTCAGCCA CTTAAAGAGG ATTATGGTGT TCAGCTGGTC
Consensus CAATAGACTG cAgTATcTTA tTGATTTGGG TCGTGTTGAT CCTAgTCAAC CTATTGACTT AACCCAGCTT GTCAATGGgA GAGGTGTGAC CATcCAGCCA CTTAAAagGG ATTATGGTGT cCAGCTGGTt
521 650
MRPL15_CDS GAGGAGGGTG CTGACACCTT T--------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
MRPL15_mRN GAGGAGGGTG CTGACACCTT T--------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
MRPL15P1 GAAAAGGCCG CAGACACCTT TCAGGTGAAA GTTAATATTG GGCCGGGCGC GGTGGCTCAC ACCTGTAATC CCAGCACTTT GGCAGGCCAA GGGGGGTGGA TCATGAGGTC AGGAGATTGA GACCACCCTG
MRPL15P2 GAAAAGGCCG CAGACACCTT TCAGGTGAAA GTTAATATTG GGCCGGGCGC GGTGGCTCAC ACCTGTAATC CCAGCACTTT GGCAGGCCAA GGGGGGTGGA TCATGAGGTC AGGAGATTGA GACCACCCTG
Consensus GAggAGGgtG CtGACACCTT T......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
651 780
MRPL15_CDS ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
MRPL15_mRN ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ----------
MRPL15P1 GCCACCGTGG TGAAACCCCG TCTTATTAAA AATGCAAAAA TTAGCCAGGC ATGGTGGCAC GTGCCTGTAG TCCCAGCTAC TTGGGAGGCT GAGGTAGGAG AATCACTTGA ACCCGGGAGG TGGAGGTTGC
MRPL15P2 GCCACCGTGG TGAAACCCCG TCTTATTAAA AATGCAAAAA TTAGCCAGGC ATGGTGGCAC GTGCCTGTAG TCCCAGCTAC TTGGGAGGCT GAGGTAGGAG AATCACTTGA ACCCGGGAGG TGGAGGTTGC
Consensus .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... .......... ..........
781 910
MRPL15_CDS ---------- ---------A CGGCA----- ---------- ---------- ---------- ---------- ---------- AAAGTTAATA TTGAAGTACA GTTGGCTTCA GAACTAGCTA TTGCTGCCAT
MRPL15_mRN ---------- ---------A CGGCA----- ---------- ---------- ---------- ---------- ---------- AAAGTTAATA TTGAAGTACA GTTGGCTTCA GAACTAGCTA TTGCTGCCAT
MRPL15P1 AGTGAGCTGA GATCATGCCA CTGCACTCCA GTCTGATGAC AGAGTGAGAC CCCCTGTCCA AAAAAAAAAA AAAAAAAAAA AAAGTTAATA TTGAAGTACA GTTGGCTTCA GAACTAGCTA TTGCTGCAAT
MRPL15P2 AGTGAGCTGA GATCATGCCA CTGCACTCCA GTCTGATGAC AGAGTGAGAC CCCCTGTCCA AAAAAAAAAA AAAAAAAAAA AAAGTTAATA TTGAAGTACA GTTGGCTTCA GAACTAGCTA TTGCTGCAAT
Consensus .......... .........A CgGCA..... .......... .......... .......... .......... .......... AAAGTTAATA TTGAAGTACA GTTGGCTTCA GAACTAGCTA TTGCTGCcAT
911 1040
MRPL15_CDS TGAAAAAAAT GGTGGTGTTG TTACTACAGC CTTCTATGAT CCAAGAAGTC TGGACATTGT ATGCAAACCT GTTCCATTCT TTCTTCGTGG ACAACCCATT CCAAAAAGAA TGCTTCCACC AGAAGAACTG
MRPL15_mRN TGAAAAAAAT GGTGGTGTTG TTACTACAGC CTTCTATGAT CCAAGAAGTC TGGACATTGT ATGCAAACCT GTTCCATTCT TTCTTCGTGG ACAACCCATT CCAAAAAGAA TGCTTCCACC AGAAGAACTG
MRPL15P1 TGAAAAAAAT GGTGGTGGTG TCACTACAGC CTTACAGGAT CCAAGAAGTC TGGAAATTCT ATCCAAACCT GTTCCATTCT TTTT--GGAG ACAACCCATT CCAAAAAGAA TGCTTCCTTC TGAAGCACTG
MRPL15P2 TGAAAAAAAT GGTGGTGGTG TCACTACAGC CTTACAGGAT CCAAGAAGTC TGGAAATTCT ATCCAAACCT GTTCCATTCT TTTT--GGAG ACAACCCATT CCAAAAAGAA TGCTTCCTTC TGAAGCACTG
Consensus TGAAAAAAAT GGTGGTGtTG TtACTACAGC CTTctAtGAT CCAAGAAGTC TGGAcATTgT ATgCAAACCT GTTCCATTCT TTcTtcGtgG ACAACCCATT CCAAAAAGAA TGCTTCCacC aGAAGaACTG
1041 1170
MRPL15_CDS GTACCATATT ACACTGATGC AAAGAACCGT GGGTACCTGG CGGATCCTGC CAAATTTCCT GAAGCACGAC TTGAACTCGC CAGGAAGTAT GGTTATATCT TACCTGATAT CACTAAAGAT GAACTCTTCA
MRPL15_mRN GTACCATATT ACACTGATGC AAAGAACCGT GGGTACCTGG CGGATCCTGC CAAATTTCCT GAAGCACGAC TTGAACTCGC CAGGAAGTAT GGTTATATCT TACCTGATAT CACTAAAGAT GAACTCTTCA
MRPL15P1 GTACCATATT CCACCAATGC AAAGAATCGT GGGAACCTGG CAGATCCTGC CAAATTTCCT GAAGCACAAC TTGAGCTTGC CAGGAAGGAC AGTTCTAATT TACTGGATAT CACGAAAGAA GAACTCTTCA
MRPL15P2 GTACCATATT CCACCAATGC AAAGAATCGT GGGAACCTGG CAGATCCTGC CAAATTTCCT GAAGCACAAC TTGAGCTTGC CAGGAAGGAC AGTTCTAATT TACTGGATAT CACGAAAGAA GAACTCTTCA
Consensus GTACCATATT aCACtgATGC AAAGAAcCGT GGGtACCTGG CgGATCCTGC CAAATTTCCT GAAGCACgAC TTGAaCTcGC CAGGAAGtAt gGTTaTAtcT TACctGATAT CACtAAAGAt GAACTCTTCA
1171 1300
MRPL15_CDS AAATGCTCTG TACTAGGAAG GATCCAAGGC AGATTTTCTT TGGTCTTGCT CCAGGATGGG TGGTGAATAT GGCCGATAAG AAAATCCTAA AACCTACAGA TGAAAATCTC CTTAAGTATT ATACCTCATG
MRPL15_mRN AAATGCTCTG TACTAGGAAG GATCCAAGGC AGATTTTCTT TGGTCTTGCT CCAGGATGGG TGGTGAATAT GGCCGATAAG AAAATCCTAA AACCTACAGA TGAAAATCTC CTTAAGTATT ATACCTCATG
MRPL15P1 AA-TGTTCAG TACTCAGAAG GATCCAAGGC AGATTTTCTT TGAGTTTGCT CCAGGATGGG TGCTGAATAT AGTAGATAAG AAAATCCTAA CATCTACAGA TGAAAATCTC CTCAAGTACT AGAGCTCATG
MRPL15P2 AA-TGTTCAG TACTCAGAAG GATCCAAGGC AGATTTTCTT TGAGTTTGCT CCAGGATGGG TGCTGAATAT AGTAGATAAG AAAATCCTAA CATCTACAGA TGAAAATCTC CTCAAGTACT AGAGCTCATG
Consensus AAaTGcTCtG TACTagGAAG GATCCAAGGC AGATTTTCTT TGgtcTTGCT CCAGGATGGG TGgTGAATAT gGccGATAAG AAAATCCTAA aAcCTACAGA TGAAAATCTC CTtAAGTAtT AtAcCTCATG
1301 1430
MRPL15_CDS A
MRPL15_mRN AATTCCCGTC CAAGGAAGCA GAGTTGTTAA AGAGTACTGG AATAGGGGCT GA-AGGATCT ATATTCCCTT ATTGCATTTT CCTTATGTAT AATTTTCCAG ATGGT----- ------GATG TTACTTTTCA
MRPL15P1 AATTCCCATC CAAGAAAGCA GAGTTGTTAA AGAATATTAG AAAAGGGCCA GGCACAATGG CTAACACCTG TAATCTCAGC ACTTTGGGAG GCCGAAGAGG GTGGATCGTG AGATCAGGAG TTTGAGACCA
MRPL15P2 AATTCCCATC CAAGAAAGCA GAGTTGTTAA AGAATATTAG AAAAGGGCCA GGCACAATGG CTAACACCTG TAATCTCAGC ACTTTGGGAG GCCGAAGAGG GTGGATCGTG AGATCAGGAG TTTGAGACCA
Consensus Aattccc.tc caag.aagca gagttgttaa aga.ta.t.g aa.aggg.c. g..a..at.. .ta...cct. ....c..... .ctt..g.a. .........g .tgg...... ......g..g tt......ca
1431 1529
MRPL15_CDS
MRPL15_mRN GTGTA-CTCA TATGTCTCAT TTTCATCTAA AATTAAATGG CAGGAAACAA GGACTGCATA GAGAAAAAAA AAAAAAAAAA AAAAA
MRPL15P1 GCCTGGCCAA CATGGCGAAA CCCCGTCTCT ACTAAAAATA CAA-AAATTA GCCAGGCATG GTGGCAGACG CCGGCAATCC CAGCTACTCG GGAGGCTGA
MRPL15P2 GCCTGGCCAA CATGGCGAAA CCCCGTCTCT ACTAAAAATA CAA-AAATTA GCCAGGCATG GTGGCAGACG CCGGCAATCC CAGCTACTCG GGAGGCTGA
Consensus g..t..c..a .atg.c..a. ...c.tct.. a.t.aaa... ca..aaa..a g....gcat. g.g..a.a.. .....aa... .a........ .........